Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920937.1_cds_XP_016469990.1_62487
CDS Infomation

[gene=LOC107792301] [db_xref=GeneID:107792301] [protein=phospholipase D alpha 4-like isoform X3] [protein_id=XP_016469990.1] [location=complement(join(29776..30209,30616..31807,33767..33853))] [gbkey=CDS]
Sequence

ATGGAGGGCAAATATAAGTGTTTTCATGGAACACTTGAAGTCTCTATTTTCCGTGCCACA
TCTCATAAGTCATCTATTCCTCTCAAGGTCCGTGATCCCAGTACAGAAATTATGCATGCA
AAAGGAGTAAAGCTAGGCGAATTACTGAAGCGCAAAGCAGAGGAAGGTGTGGCTGTGAGG
ATCATGCTTTGGGACGACGAAACATCCTTACCAATAATCAAGAACAAAGGAGTAATGAGA
ACACACGACGAAGATTCTTTAGCCTATTTCAGAGACACAAAAGTAGTATGCAAATTAGTT
CCCAGATTACACCATAAACTGCCTTCATTCTTTGCACATCATCAAAAAGTAATAACAGTA
GATTCAAGAAGTCATCTATCTTCAACTAGTCGAGAAATCACTAGCTTTATCGGTGGTTTA
GACCTTTGTGATGGTCGCTACGATACAGAAGAACACTCCTTGTTTAAAACTCTCAACACA
GAATCACATTGCTACGATTTCTATCAAACGAGTCTATCTGGTGCAAGCCTACACAAAGGA
GGGCCGAGAGAACCATGGCACGATGCTCACGCTCGTGTCACAGGACAAGCAGCTATGGAT
ATACTCAACAATTTTGAACAAAGATGGAATAAGCAAATTGGCCCTTCTTTGCTCATTCCT
ATAAGATCCATTCCAGAACTAAGCAATCAGCCAAACATGGCTTCTACTGATCGCGATTGG
AACGTTCAAGTCTTTCGTTCAATTGATCATGTCTCAGCATGCCCTTTGCCTATGAACATG
CCAATTGAAAGAAGCATACATGAAGCTTATGTAGAAGCGATTAGACGAGCTGACAGATTT
ATTTACATAGAAAATCAGTATTTCATCGGTGCATGTCACCTTTGGGAGCAAGATCAACAT
TGTGGCTGTAGAAATTTAATTCCAATAGAGATTGCACTAAAAGTTGCAAACAAAATCAAA
GCTAAAGAGCGATTCGCTGTGTACATTGTGATACCAATGTGGCCTGAAGGATTGCCAGAA
AGTGATTCAGTTCAAGATATATTGCATTGGACTAGAGAAACAATGAAGATGATGTATAAA
TTTATAGGTGAAGCTATTAAAGAAAGTGGTGAGCCAGGACATCCTAGAGATTACTTGAAT
TTCTTCTGCCTTGCAAACAGAGAAGAAGAGTTCAAGGGAGAGTTTGTTCCTCCTTATTCT
CCACATCCTGAATCACAATATTGGAAAGCTCAAAAGAAAAGAAGATTCATGGTTTATGTC
CACTCTAAGCTCATGATAGTGGATGACACCTACTTATTAATTGGTTCTGCTAACATAAAT
CAAAGATCCATGGATGGGCAACGAGACACAGAGATTGCAATAGGATGCTATCAGTCGAAA
AGTGAAGAAGGCGACATAGATCAAAGGGACGTTCATGCATATCGTATGTCATTGTGGTAT
GAGCATACAGCAAAAGCAGAACAAGTGTTTCAAGAGCCTCAAAGCTTAGAATGCGTGCAA
AAAATCCGTTCTATCGGAGACCAATTGTGGAAGATTTACGATCAAGATGAAGTAGAAGAT
ATGAAGGGTGTTCATTTGGTCACATACCCTGTGAATGTGACTGCAGAAGGTCATGTTGTG
GATATTATGGAGAGAAATGGTCACTTCCCTGATACAGAAGCACTAATAAAAGGGAGGAGA
TCGAAAGTTTTAGCACCTACAATTACTACATAG

Peptide Sequence

PEP ID

XP_016469990.1
PEP Infomation

PREDICTED: phospholipase D alpha 4-like isoform X3 [Nicotiana tabacum]
Sequence

MEGKYKCFHGTLEVSIFRATSHKSSIPLKVRDPSTEIMHAKGVKLGELLKRKAEEGVAVR
IMLWDDETSLPIIKNKGVMRTHDEDSLAYFRDTKVVCKLVPRLHHKLPSFFAHHQKVITV
DSRSHLSSTSREITSFIGGLDLCDGRYDTEEHSLFKTLNTESHCYDFYQTSLSGASLHKG
GPREPWHDAHARVTGQAAMDILNNFEQRWNKQIGPSLLIPIRSIPELSNQPNMASTDRDW
NVQVFRSIDHVSACPLPMNMPIERSIHEAYVEAIRRADRFIYIENQYFIGACHLWEQDQH
CGCRNLIPIEIALKVANKIKAKERFAVYIVIPMWPEGLPESDSVQDILHWTRETMKMMYK
FIGEAIKESGEPGHPRDYLNFFCLANREEEFKGEFVPPYSPHPESQYWKAQKKRRFMVYV
HSKLMIVDDTYLLIGSANINQRSMDGQRDTEIAIGCYQSKSEEGDIDQRDVHAYRMSLWY
EHTAKAEQVFQEPQSLECVQKIRSIGDQLWKIYDQDEVEDMKGVHLVTYPVNVTAEGHVV
DIMERNGHFPDTEALIKGRRSKVLAPTITT

Transcript Sequence

Gene sequence data has not been registered.